So there are two things that the subplot function in Matlab can not do.
1. Generate an "overall" title on the top of all sub-figures.
2. Make the sub-figures as compact as possible (usually very large margins will be made).
Normally, what we can do is save each sub-figure as eps or pdf, and use LaTeX to organize them. This works well and I highly recommend this way when you are preparing publication ready figures, but there are times that you just want to generate some report quickly and nicely.
So I found this two nice functions in Matlab file exchange:
1. mtit. This one will place a title automatically for you on top of everything.
2. subaxis. This one does roughly the same thing as "subplot", but with options that enables you to remove margins.
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